Publications

• 

  (2) University of Hamburg - Department of Biochemistry

  Prof. Dr. Zoya Ignatova
  Martin-Luther-King-Platz 6 - 20146 Hamburg - Germany
  Website - e-mail: Zoya.Ignatova[at]chemie.uni-hamburg.de
  Tel: +49 (0)40 42838 2332
  

1. Bartholomäus, A., Fedyunin, I., Feist, P., Sin, C., Zhang G., Valleriani, A. and Ignatova, Z. (2016) Bacteria differently regulate mRNA abundance to specifically respond to various stresses. Phil. Transact., in press.
   .:Collaborative Publication:.
   
2. Bartholomäus, A., Del Campo, C. and Ignatova Z. (2016) Mapping the non-standardized biases of ribosome profiling, Biol. Chem., 397, 23-35.
3. Del Campo, C. and Ignatova, Z. (2015) Probing dimensionality beyond the linear sequence of mRNA. Curr Genet., in press
4. Del Campo, C., Bartholomäus, A., Fedyunin, I. and Ignatova, Z. (2015) Secondary structure across the bacterial transcriptome reveals versatile roles in mRNA regulation and function. PLoS Genet. 11, e1005613
5. Ferro, I. and Ignatova, Z (2015) Quantifying the 'escapers' among RNA species. Biochem. Soc. Trans. 43, 1215-20
6. Gorochowski, T.E., Ignatova, Z., Bovenberg, R.A. and Roubos, J.A. (2015) Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate. Nucl. Acids Res. 43, 3022-32.
   .:Collaborative Publication:.
   
7. Kirchner, S. and Ignatova, Z. (2015) Emerging roles of tRNA in adaptive translation, signaling dynamics and disease. Nat. Rev. Genetics 16, 98-112
8. Puri, P., Wetzel, C., Saffert, P., Gaston, K.W:, Russell, S.P., van der Vlies, P., Zhang, G., Limbach, P.A., Ignatova, Z., Poolman, B. (2014) Systematic identification of tRNAome and its dynamics in Lactococcus lactis. Mol. Microbiol. 93, 944-956
   .:Collaborative Publication:.
   
9. Bentele, K., Saffert, P., Rauscher, R., Ignatova, Z., and Blüthgen, N. (2013) Efficient translation initiation dictates codon usage at gene start in bacteria. Mol. Syst. Biol. 9, 675.
10. Czech, A., Wende, S., Mörl, M., Pan, T., and Ignatova Z. (2013) Reversible and rapid transfer-RNA deactivation as a mechanism of translational repression in stress. PLoS Genet 9(8):e1003767.
11. Zhang, G., Fedyunin, I., Valleriani, A., and Ignatova, Z. (2012) FANSe: an accurate algorithm for quantitative mapping of large scale sequencing reads. Nucl. Acid. Res. 40, e83.
    .:Collaborative Publication:.
    
12. Fedyunin, I., Lehnhardt. L., Böhmer, N., Kaufamnn, P., Zhang, G., and Ignatova, Z. (2012) tRNA concentration fine tunes protein solubility, FEBS Lett. 586, 3336-340.